Mechanistic models of microbial community metabolism
نویسندگان
چکیده
منابع مشابه
Coupling Spatiotemporal Community Assembly Processes to Changes in Microbial Metabolism
Community assembly processes generate shifts in species abundances that influence ecosystem cycling of carbon and nutrients, yet our understanding of assembly remains largely separate from ecosystem-level functioning. Here, we investigate relationships between assembly and changes in microbial metabolism across space and time in hyporheic microbial communities. We pair sampling of two habitat t...
متن کاملMicrobial models of mammalian metabolism: O-dealkylation of para-alkoxybiphenyls.
The potential of selected microorganisms to O-dealkylate alkyl aryl ethers in a manner analogous to mammalian systems has been studied. A total of 45 fungi and actinomycetes were screened for their ability to O-demethylate 4-methoxybiphenyl. Of the 20 organisms found to actively metabolize this substrate, 5 were chosen for additional study. Incubation with a series of five homologous 4-alkoxybi...
متن کاملAnalysis via Mechanistic Models
The purpose of time series analysis via mechanistic models is to reconcile the known or hypothesized structure of a dynamical system with observations collected over time. We develop a framework for constructing nonlinear mechanistic models and carrying out inference. Our framework permits the consideration of implicit dynamic models, meaning statistical models for stochastic dynamical systems ...
متن کاملModels and Mechanistic Insight
" The mission of the Journal of General Physiology is to publish original work of the highest quality that elucidates basic biological, chemical, or physical mechanisms of broad physiological signifi cance. This expectation — that the articles provide mechanistic insight — has served the Journal well; it also has been cause for much uncertainty , mostly pertaining to what actually constitutes m...
متن کاملUnderstanding microbial metabolism.
Metabolism encompasses the biochemical basis of life and as such spans all biological disciplines. Many decades of basic research, primarily in microbes, have resulted in extensive characterization of metabolic components and regulatory paradigms. With this basic knowledge in hand and the technologies currently available, it has become feasible to move toward an understanding of microbial metab...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Molecular Omics
سال: 2021
ISSN: 2515-4184
DOI: 10.1039/d0mo00154f